Published:

[BNL_09] P. Borovska, O. Nakov, M. Lazarova, PARMETAOPT – Parallel Metaheuristics Framework for Combinatorial Optimization Problems, IEEE International Workshop on Intelligent Data Acquisition and Advanced Computing Systems, Technology and Applications, September 21-23, 2009, Rende (Cosenza), Italy, Proceedings, 225-230
[C_09] I. P. Christov, Polynomial-Time-Scaling Quantum Dynamics with Time-Dependent Quantum Monte Carlo, J. Phys. Chem. A 2009, 113, 6016–6021
[DG_09] I. Dimov, R. Georgieva, Monte Carlo algorithms for evaluating Sobol’ sensitivity indices, Math. Comput. Simul. (2009), doi:10.1016/j.matcom.2009.09.005.
[DGFD_09] Dimitrov, I., Garnev, P., Flower, D.R., Doytchinova, I. Peptide binding to the HLADRB1 supertype: A proteochemometrics analysis. Eur. J. Med. Chem., 45 (2010) 236-243
[KMV_09] N. Kosturski, S. Margenov, Y. Vutov, Efficient Solution of μFEM Elasticity Problems in the Case of Almost Incompressible Materials, 3rd Annual Meeting of the Bulgarian Section of SIAM, Proceedings (2009), 65-68
[LPPMI_08] L. Litov, P. Petkov, P. Petkov, S. Markov, N. Ilieva, Understanding of Human Interferon- Gamma Binding, Proc. of Fourth International Conference “ComputerScience’2008” and International Workshop on BioComputing’2008, Kavala, Greece, 18-19 Sept. 2008, ISBN: 978-954-580-254-6, .37÷42.
[LZPI_09] V. Lazarov, Z. Zlatev, Ph. Philipov M. Ivanova, Analytic Evaluation of Heterogeneous Shared-memory Multiprocessors, International Conference Automatics and Informatics’09 (2009), Proceedings, ISSN: 1313-1850, vol. I, 1-4
[NBKA_09] O. Nakov, P. Borovska, N. Kuchmova, D. Andreeva, Multiprocessor-based real-time control of a moving object, 8th WSEAS Int. Conf. on Applied Computer and Applied Computational Science (ACACOS '09), May 20-22, 2009, Zhejiang University of Technology, Hangzhou, China, Proceedings, 495-499
[P_09] S. Petrova, Applications of one-shot methods in PDEs constrained shape optimization, Mathematics and Computers in Simulation, 80, No. 3 (2009), ISSN: 0378-4754, 581-597.
[PCLZI_09] Ph. Philipov, I. Costov, V. Lazarov, Z. Zlatev, M. Ivanova, Implementation of a Parallel Architecture for Radix-2 FFT, Journal Information Technologies and Control, Year VI, Nr. 2 (2009), ISSN: 1312-2622, 12-16
[TTT_09] T. Tashev, S. Tashev, N. Tasheva, PIM – Memory Modules with increased Performance and Intelligence, Journal Information Technologies and Control, Year VII, Nr. 3 (2009), ISSN: 1312-2622, 17-22
[V_09] Y. Vutov, Scalability Tests of Two Parallel PCG Solvers on Blue Gene/P, 3rd Annual Meeting of the Bulgarian Section of SIAM, Proceedings (2009), 87-90

Accepted for publication:

[BGG1_09a] P. Borovska, G. Georgiev, I. Georgiev, 4x4 Switch Design and Simulation Analysis with OMNeT++, Fifth International Conference "Computer Science" 5-6 November 2009, International Workshops "Supercomputers Architecture and Applications", Technical University – Sofia, Bulgaria, Proceeding
[BGG2_09a] P. Borovska, I. Georgiev, G. Georgiev, Modelling and Simulation Environments for Network on Chip Architectures: Survey, Fifth International Conference "Computer Science" 5-6 November 2009, International Workshops "Supercomputers Architecture and Applications", Technical University – Sofia, Bulgaria, Proceeding 
[BIIG_09a] P. Borovska, D. Ivanova, K. Ivanov, G. Georgiev, Multi-core Architectures and Streaming Applications – trends, innovations and perspectives, Fifth International Conference "Computer Science" 5-6 November 2009, International Workshops "Supercomputers Architecture and Applications", Technical University – Sofia, Bulgaria, Proceeding
[BNIR_09a] P. Borovska, O. Nakov, D. Ivanova, A. Ruzhekov, A Comparative Analysis of Next Generation High-End Switch Architectures, Fifth International Conference "Computer Science" 5-6 November 2009, International Workshops "Supercomputers Architecture and Applications", Technical University – Sofia, Bulgaria, Proceeding
[BR_09a] Baltov A., Radev St., Some New Approaches for Modeling the Technological Processes by Continuum Mechanics, Proc.of the 11th National Congress on Theoretical and Applied Mechanics, Borovetz, September 2-5, 2009
[C_09a] I. P. Christov, Time-Dependent Quantum Monte Carlo-principles and perspectives, American Institute of Physics Conference Proceedings
[DG_09a] I. Dimov, R. Georgieva, Monte Carlo Adaptive Technique for Sensitivity Analysis of a Large-Scale Air Pollution Model, Large Scale Scientific Computing, Springer LNCS 5910
[GPDSLIOT_09a] M. Ganzha, M. Paprzycki, M. Drozdowicz, M. Senobari, I. Lirkov, S. Ivanovska, R. Olejnik, P. Telegin, Information flow and mirroring in an agent-based Grid resource brokering system, Large Scale Scientific Computing, Springer LNCS 5910
[GZ1_09a] K. Georgiev, Z. Zlatev, Runs of UNI–DEM Model on IBM BlueGene/P Computer and Analysis of the Model Performance, Large Scale Scientific Computing, Springer LNCS 5910
[GZ2_09a] K. Georgiev, Z. Zlatev, Comparison results of running of the Danish Eulerian Model for long-range transport of air pollutants on different kind of high-performance computer architectures, Theoretical and Applied Mechanics.
[HP_09a] R.H.W. Hoppe and S.I. Petrova, Multi-scale method for the crack problem in microstructural materials, Computational Methods in Applied Mathematics, Volume 10, 2010
[IPN_09a] S. Iliev, N. Pesheva, V. Nikolayev, Dynamic study of the contact angle hysteresis in the presence of periodic defects. 11-th National Congress on Theoretical and Applied Mechanics , Borovets, Bulgaria, September 2-5, 2009
[K_09a] A. Kuncheva, DSP algorithms in modern programmable architecture - parallelisms of implementation, Fifth International Conference "Computer Science" 5-6 November 2009, International Workshops "Supercomputers Architecture and Applications", Technical University – Sofia, Bulgaria, Proceeding 
[KM_09a] N. Kosturski, S. Margenov, Numerical Homogenization of Bone Microstructure, Large Scale Scientific Computing, Springer LNCS 5910
[LLPPM_09a] E. Lilkova, L. Litov, P. Petkov, P. Petkov, S. Markov, Computer simulation of human interferon-gamma mutants, Heron Press, Sofia
[LLPPMI_09a] E. Lilkova, L. Litov, P. Petkov, P. Petkov, S. Markov, and N. Ilieva, Computer simulations of human interferon-gamma mutated forms, Proceedings of BPU7, Alexandroupolis, 2009
[LVGP_09a] I. Lirkov, Y. Vutov, M. Ganzha, M. Paprzycki, Parallel Performance Evaluation of MIC(0) Preconditioning Algorithm for Voxel μFE Simulation, Proceedings of Parallel processing and applied mathematics, 2009
[MDK_09a] P. Manoilov, B. Delijska, P. Krivoshieva, FPGA Parallel DSP realized by Multiprocessor System on FPGA-Chip, Fifth International Conference "Computer Science" 5-6 November 2009, International Workshops "Supercomputers Architecture and Applications", Technical University – Sofia, Bulgaria, Proceeding 
[NZMK_09a] I. Nikolova, G. Zapryanov, P. Manoilov, E. Kucidimova, FPGA-based Architecture for Digital Image Visualization, Fifth International Conference "Computer Science" 5-6 November 2009, International Workshops "Supercomputers Architecture and Applications", Technical University – Sofia, Bulgaria, Proceeding 
[ODGZ_09a] Tz. Ostromsky, I. Dimov, R. Georgieva, Z. Zlatev, Sensitivity Analysis of a Large-scale Air Pollution Model: Numerical Aspects and a Highly Parallel Implementation, Large Scale Scientific Computing, Springer LNCS 5910
[P_09a] S. Petrova, On Shape Optimization of Acoustically Driven Microfluidic Biochips, Large Scale Scientific Computing, Springer LNCS 5910

Subnitted:

[BMN_09s] P. Boyanova, S. Margenov, M. Neytcheva, Robust AMLI Methods for Elliptic and Parabolic Crouzeix-Raviart FEM systems, Computational Methods in Applied Mathematics
[DGFD_09s] Dimitrov, I., Garnev, P., Flower, D.R., Doytchinova, I. MHC class II binding prediction – a little help from a friend. J. Biomed. Biotech
[DGIOZ_09s] I. Dimov, R. Georgieva, S. Ivanovska, Tz. Ostromsky, Z. Zlatev, Studying the Sensitivity of the Pollutants Concentrations Caused by Variations of Chemical Rates, Journal of Computational and Applied Mathematics
[DPP_09s] L. Dechevsky, N. Popivanov, T. Popov, Asymptotic expansions of singular solutions of Protter problem, SIAM JMA
[GDFD_09s] Garnev, P., Dimitrov, I., Flower, D.R., Doytchinova, I. EpiTOP – a proteochemometric tool for MHC class II binding prediction
[GZ_09s] K. Georgiev, Z. Zlatev, Notes on the Numerical Treatment of Sparse Matrices Arising in a Chemical Model, Proc. of BGSIAM meeting, December 21 – 22, 2009
[IPI_09s] S. Iliev, N. Pesheva, D. Iliev, Asymptotic solutions for the relaxation of the contact line in the Wilhelmy-plate geometry: the contact line dissipation approach, Physical Review E
[PPS_09s] N. Popivanov, T. Popov, R. Scherer, Semi-Fredholm solvability of 3+1 –D Protter problems, JMAA

In preparation:

[DGFD_09p] Dimitrov, I., Garnev, P., Flower, D.R., Doytchinova, I. Fusion method for MHC class II binding prediction
[GZ1_09p] K. Georgiev, Z. Zlatev, Implementation of sparse matrix algorithms in an advection-difusionchemistry module
[GZ2_09p] K. Georgiev, Z. Zlatev, Impact of climate changes on high ozone pollution levels over the territory of South-Eastern Europe
[IPN_09p] S. Iliev, N. Pesheva, V. Nikolayev, Dynamics and depinning of the triple contact line in the presence of periodic surface defects
[K_09p] N. Kosturski, Scalable PCG Solution Algorithms for μFEM Elasticity Systems
[KTPP_09p] B. Kefitz, A. Tessdal, K. Payne, N. Popvanov, The Sonic Line as a Free Boundary
[LMM_09p] V. Lazarov, M. Marinova, T. Marinov, System Characteristics and Parameters Evaluation for Multithreading Processors through Simulation
[LPPMI_09p] L. Litov, P. Petkov, P. Petkov, S. Markov, and N. Ilieva, Understanding of interferongamma binding
[ODGZ_10p] Tz. Ostromsky, I. Dimov, R. Georgieva, Z. Zlatev, Sensitivity Analysis version of an Air Pollution Model: Parallel Implementation and Numerical Results, Journal of Management of Environmental Quality
[PN_09p] N. Popivanov, А. Nikolov, Exact behavior of Singular Solutions for (3+1)-D Protter Problem with lower order terms
[PP1_09p] N. Popivanov, T. Popov, Estimates for the singular solutions of the Protter's problem for degenerated hyperbolic equation
[PP2_09p] N. Popivanov, T. Popov, Nontrivial solutions of 3–D Darboux problems for a class of degenerate hyperbolic equations
[PPS_09p] N. Popivanov, T. Popov, R. Scherer, Semi-Fredholm solvability of Protter boundary value problem
[PPVR_09p] P. St. Petkov, G. P. Petrova, G. N. Vayssilov, and N. Rцsch, Computational Model Study of Hydrogen Adsorption on Rhodium and Platinum Clusters in Gas Phase or Supported on Zeolite
[PSH_09p] N. Popivanov, M. Schneider, T. Hristov, On Uniqueness of Quasi-regular Solutions for Equations of Mixed Type in R3
[PVR_09p] G. P. Petrova, G. N. Vayssilov, and N. Rцsch, Oxidation or Reduction of Tetrahedral Iridium Clusters by Hydrogen Depending on the Cluster Charge
[RBO_09p] Radev St., Boyadjiev T., Onofri F., A Model of Steady Glass Fiber Drawing Process as a Non-LinearEigenvalue Problem
[RO_09p] Radev St., Onofri F., Bending instability of viscous capillary jets
[RV_09p] M.A. Rangelov, G.N. Vayssilov, Catalysis by Vicinal Hydroxyl in 1,2-Diol Monoester Aminolysis: Implications for the Ribosome Mechanism
[V_09p] Y. Vutov, Parallel MIC(0) Preconditioning for Numerical Upscaling of Anisotropic Linear Elasticity Materials

[B_09] P. Bambova, Free energy of salvation of amino acids, CCP 5 Summer School on Methods in Molecular Simulation, England, July 2009
[BR_09] Baltov A., Radev St., Some New Approaches for Modeling the Technological Processes by Continuum Mechanics, Borovetz, September 2-5, 2009
[DGFD1_09] Dimitrov, I., P. Garnev, D. R. Flower, I. Doytchinova: T-cell epitope prediction: A proteochemometric approach, 1st National Conference with International Participation on Biomedical and Bioprocess Engineering, Sofia, 3-4 December 2009
[DGFD2_09] Dimitrov, I., P. Garnev, D. R. Flower, I. Doytchinova: Comparative study on servers for T-cell epitope prediction (poster), 1st National Conference with International Participation on Biomedical and Bioprocess Engineering, Sofia, 3-4 December 2009
[G1_09] K. Georgiev, Comparison Results of Running of the Danish Eulerian Model (UniDEM) on Different Kind of Vector and Parallel Computers, Workshop on Numerical Methods and High Performance Computations – interplay and novel ideas, Sofia, February 17-18, 2009
[G2_09] K. Georgiev, Runs of UniDEM Model on IBM BlueGene/P Computer and Analysis of the Model Performance, 7th International Conference on Large Scale Scientific Computations, LSSC'09, Sozopol, June 4-8, 2009
[G3_09] K. Georgiev, Comparison Results of Running of the Danish Eulerian Model for Long Range Transport of Air Pollutants on Different Kind of High-Performance Computer Architectures, 22nd workshop on tropospheric chemical transport modelling, Brescia, Italy, Nov. 26-27, 2009
[G4_09] R. Georgieva, Monte Carlo Adaptive Technique for Sensitivity Analysis of a Large-Scale Air Pollution Model, 7th International Conference on Large Scale Scientific Computations, LSSC'09, Sozopol, June 4-8, 2009
[G5_09] D. Grancharov, Studying of protein binding with ligand with DOCK 6.2, 7th Students Conference of the Balkan Physics Union, Bodrum, Turkey, Sept. 3-7, .2009
[G6_09] D. Grancharov, Studying of Viscum Album Agluttinin binding with Zeatin, N6-adenin and N6-benzyladenin with DOCK 6.2, Federation of European Biochemical Societies, School of Protein Science “From basic research to drug design”, Sofia, Sept. 21-26,.2009
[GDFD_09] Garnev, P., I. Dimitrov, D. R. Flower, I. Doytchinova: EpiTOP – a proteochemometric tool for T-cell epitope prediction (poster), 1st National Conference with International Participation on Biomedical and Bioprocess Engineering, Sofia, 3-4 December 2009
[H_09] Tz. Hristov, On Uniqueness of Quasi-regular Solutions for Equations of Mixed Type in R3, MASSEE International Congress on Mathematics, MICOM 2009, Оhrid, Sept. 16-20, 2009
[I_09] S. Iliev, Dynamic study of the contact angle hysteresis in the presence of periodic defects, 11-th National Congress on Theoretical and Applied Mechanics , Borovets, Bulgaria, Sept. 2-5, 2009
[K1_09] N. Kosturski, Scalable PCG Solution Algorithms for μFEM Elasticity Systems, Mathematics and Computers in Simulation, Modelling 2009, Roznov pod Radhostem,  Czech Republic, June 22 - 26, 2009
[K2_09] N. Kosturski, Scalable PCG Solution Algorithms for μFEM Elasticity Systems, Mathematics and Computers in Simulation, Annual Meeting of BGSIAM’09, Sofia, Dec. 21 – 22, 2009
[L1_09] E. Lilkova, Computer simulation of human interferon-gamma mutants, Meetings in Physics, Sofia University, March 2009
[L2_09] I. Lirkov, Parallel Performance Evaluation of MIC(0) Preconditioning Algorithm for Voxel μFE Simulation, 8th International Conference on Parallel Processing and Applied Mathematics, Wroclaw, September 13-16, 2009
[L3_09] L. Litov, Computer-aided drug design, Bulgarian-Japanese Symposium Genomics and Proteomics in Personalized Medicine, Sofia, March 19-22, 2009
[M1_09] S. Margenov, Blue Gene in Bulgaria – Center of Excellencs on Supercomputing Applications – Joint Project of IPP - BAS, SU, TU - Sofia and MU - Sofia, Opening of the IBM Academic Initiative, Sofia, March 9, 2009
[M2_09] S. Margenov,  Parallel PCG algorithms for voxel FEM systems, ComplexHPC Meeting, Universidade Tecnica de Lisboa, Portugal, Oct. 19-20, 2009
[M3_09] S. Markov, PetaFlops Supercomputer Networks – one example, Workshop in IBM Research Laboratory Zurich, June 15, 2009
[O_09] Tz. Ostromsky, Sensitivity Analysis of a Large-scale Air Pollution Model: Numerical Aspects and a Highly Parallel Implementation, LSSC'09, Sozopol, June 4-8, 2009
[P1_09] P. Petkov, Computer simulations of human interferon-gamma mutated forms, 7th General Conference of the Balkan Physics Union, Alexandroupolis, Greece, September 2009
[P2_09] P. Petkov, Understanding of interferon-gamma binding,1st National Conference with International Participation on Biomedical and Bioprocess Engineering, Sofia, December 2009
[P3_09a] S. Petrova, Applications of one-shot methods in PDEs constrained shape optimization, Mathematics and Computers in Simulation, ENUMATH 2009, Uppsala, Sweden, June 29-July 3, 2009
[P4_09] N. Popivanov, Morawetz-Protter Multidimensional Problems, Conference on Non-linear Phenomena in Mathematical Physics, Nalchik, Russia, May 17-22, 2009
[P5_09] Т. Popov, Semi-Fredholm solvability of (3+1) –D Protter problems, MASSEE International Congress on Mathematics, MICOM 2009, Ohrid, September 16–20, 2009
[V1_09] G.N. Vayssilov, Density Functional Study of the Interaction of Ethene and Ethyne with Bare and Hydrogenated Ir4 clusters, 1st Workshop of the Catalysis Research Center of the TU Munich, Germany, January 2009
[V2_09]Y. Vutov, A Parallel MIC(0) Preconditioning Technique for Elliptic Problems, Bulgarian – Swedish Workshop “Numerical Methods and High Performance Computations – Integrity and Novel Ideas, IPP – BAS, Sofia, February 17-18, 2009
[V3_09] Y. Vutov, Parallel MIC(0) Preconditioning for Numerical Upscaling of Anisotropic Linear Elasticity Materials, Minisymposium on HPC-driven Numerical Methods and Applications, ENUMATH 2009, Uppsala, Sweden, June 29-July 3, 2009